Karsch-Mizrachi I, Nakamura
Y, Cochrane G; International Nucleotide Sequence Database Collaboration
Miyano S, Nakamura H, Sugano S, Danchin A, Savakis B, Weissenbach J, Weng Z,
Salzberg S
The International Nucleotide Sequence Database
Collaboration
Nucleic Acids Research (2012) 40: D33-D37 IF 7.836
MF Liu, S Cescau, U Mechold,
J Wang, D Cohen, A Danchin, HJ Boulouis, F Biville
Identification of a new nanoRNase in Bartonella
Microbiology (2012) Jan 19 [Epub ahead of print] IF 2.957
E Toledano, V Ogryzko,
A Danchin, D Ladant, U Mechold
3’‐5’phosphoadenosine phosphate is an inhibitor of Poly(ADPribose)
Polymerase 1 and a potential mediator of the lithium-dependent inhibition
of PARP‐1 in vivo
Biochemical Journal (2012) [in press] IF 5.016
A Danchin
Synthetic biology's flywheel
EMBO Reports (2012) 13: 92 IF 6.907
A Danchin
Scaling up synthetic biology: Do not forget the chassis
FEBS Letters (2012) [in press] IF 3.601
G Postic, A Danchin, U Mechold
Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma
pneumoniae
RNA (2012) 18: 155-165 IF
6.051
Y Wang, JK Yang, OO Lee, TG Li, A Al-Suwailem, A
Danchin, P-Y Qian
Bacterial niche-specific genome expansion Is coupled with highly frequent gene
disruptions in deep-sea sediments
PLoS ONE (2011) 6: e29149 IF 4.411
A Danchin, PM Binder, S
Noria
Antifragility and tinkering in biology (and in business):
Flexibility provides an efficient epigenetic way to manage risk
Genes (2011), 2: 998-1016; doi:10.3390/genes2040998
 A Danchin
Un démon entre en scène
Postface au livre de Jérôme Segal Le
Zéro et le Un (2011) Editions Matériologiques.
M Porcar, A Danchin, V de Lorenzo, VA dos
Santos, N Krasnogor, S Rasmussen, A Moya
The ten grand challenges of synthetic life
Systems and Synthetic Biology (2011) 5:
1-9
H Rohde, J Qin, Y Cui, D Li, NJ Loman, M Hentschke,
W Chen, Fei Pu, Y Peng, J Li, F Xi, S Li, Y Li, Z Zhang, X Yang, M Zhao,
Peng Wang, Y Guan, Z Cen, X Zhao, M Christner, R Kobbe, S Loos, J Oh,
L Yang, A Danchin, GF Gao, Y Song, Y Li, H Yang, J Wang, J Xu, the E.
coli O104:H4 Genome Analysis Crowd-sourcing consortium, MJ Pallen, J
Wang, M Aepfelbacher, R Yang
Open-source genomics of an isolate from a german family outbreak of Shiga-toxin-producing Escherichia
coli O104:H4
New England Journal of Medicine (2011) 365:
718-724 IF
53.484
PM Binder, A Danchin
Life's demons: information and order in biology. What subcellular machines gather
and process the information necessary to sustain life?
EMBO Reports (2011) 12: 495-499 IF 6.907
Y Wang, J Yang, OO Lee, S Dash, SC Lau,
A Al-Suwailem, TY
Wong, A Danchin, PY Qian
Hydrothermally generated aromatic compounds are consumed by bacteria colonizing in Atlantis II Deep of the Red Sea.
ISME J (2011) 5: 1652-1659 IF 6.397
F Piette, S D'Amico, G Mazzucchelli, A Danchin,
P Leprince, G Feller
Life in the cold: a proteomic study of cold-repressed proteins in the Antarctic
bacterium Pseudoalteromonas haloplanktis TAC125.
Applied and Environmental Microbiology (2011) 77: 3881-3883 IF 3.686
A Danchin
Les gènes du démon de Maxwell : est-il possible de construire une usine cellulaire
? Maxwell’s demon’s genes: Can we build a cell factory?
Comptes Rendus de l'Académie des Sciences, Chimie (2011) 14:
413-419 IF 1.580
B Wilmes, H Kock, S Glagla, D Albrecht, B Voigt,
S Markert, A Gardebrecht, R Bode, A Danchin, G Feller, M Hecker,
T Schweder
Cytoplasmic and periplasmic proteomic signatures of exponentially growing cells
of the psychrophilic bacterium Pseudoalteromonas haloplanktis TAC125.
Applied and Environmental Microbiology (2011) 77: 1276-1283 IF 3.686
A Danchin
Science and arsenic's fool's gold: a toxic broth
Journal of Cosmology (2010) 13: 3617-3620
Abstract: Making stable informational polymers in water at 300K limits chemical
variations within extremely narrow borders. This is why the basic atoms
of life — those that are found in meteoritic molecules — are hydrogen,
carbon, nitrogen and oxygen. In these same conditions, management of
energy to support life used the unique property of phosphorus to make
energy-rich metastable phosphoester or polyphosphate bonds. Analysis
of the genome of arsenic-loving bacteria suggests that arsenic can
nevertheless be accumulated in bacteria via formation of innocuous
derivatives that may decorate inert (mostly non informational) biopolymers.
However, arsenic cannot replace phosphorus in this core function of
life. This has been previously firmly established by numerous biochemical
experiments. Likewise, recent claims by Wolfe-Simon et al. (2010) that
this replacement could happen, have not been experimentally verified,
and are based on experiments lacking proper controls; the purpose of
which was to substantiate these beliefs. However, the authors are not
sole to be blamed, but the journals that try to maintain their high
impact factors at all cost, publishing articles that should never have reached
the public.
E Krin, A Danchin, O Soutourina
Decrypting the H-NS-dependent regulatory cascade of acid stress resistance
in Escherichia coli
BMC Microbiology
(2010) 161: 363-371 IF 2.890
A
Danchin
A path from predation to mutualism
Molecular Microbiology (2010) 77: 1346-1350 IF 5.361
G Postic, A Danchin, U Mechold
Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma
pneumoniae
Symplectic Biology (2010) Jun 14. Available from: http://knol.google.com/k/guillaume-postic/characterization-of-nrna-homologs-from/h0czw6d7gysp/5
F Piette, S D’Amico, C Struvay, G Mazzucchelli,
J Renaut, ML Tutino, A Danchin, P Leprince, G Feller
Proteomics of life at low temperatures: trigger factor is
the primary chaperone in the Antarctic bacterium Pseudoalteromonas
haloplanktis TAC125
Molecular Microbiology (2010) 76: 120-132
IF 5.361
A Danchin
Motivated research
EMBO Reports (2010) 11: 488 IF 6.907
Opening: Three years ago,
a senior politician attended his country’s Annual Congress for
the Advancement of Science to give the introductory lecture.
He asked the attending scientists to make science and research
more attractive to young students and the general public, and
asked his countrymen to support scientists to address the urgent
challenges of global climate change, energy needs and dwindling
water resources. It was neither a European nor a US politician,
but the Indian Prime Minister Manmohan Singh who made this speech
about the relationship between research and its practical applications.
This is such an important topic that one might think it deserves
appropriate attention in Europe, yet we fail to address it properly.
Instead, we just discuss how science should serve society or
contribute to the ‘knowledge-based economy’, or how ‘basic’ or
‘fundamental’ research is opposed to ‘applied’ or ‘industrial’
research and how funding for ‘big science’ comes at the expense
of ‘little academic’ research.
A Danchin
Perfect time, or perfect crime?
EMBO Reports (2010) 11: 74 IF 6.907
E Krin, A Danchin, O Soutourina
RcsB plays a central role in H-NS-dependent regulation of motility and acid stress
resistance in Escherichia coli
Res Microbiol (2010) 161: 363-371 IF 2.154
A Danchin, G Fang
Babies are born very young. The synthesis of change
Journal of Cosmology (2010) 7: May 2010 Artificial Life
M Vayssier-Taussat,
D Le Rhun, HK Deng, F Biville, S Cescau, A Danchin,
G Marignac, E Lenaour, Boulouis HJ, Mavris M, Arnaud L, Yang H, Wang J,
M Quebatte, P Engel, H Saenz, C Dehio
The Trw type IV secretion system of Bartonella mediates host-specific adhesion to erythrocytes
PLoS
Pathog (2010) 6:e1000946
IF 8.978
A Danchin
A challenge to vaccinology: Living organisms trap information
Vaccine (2009) 27S6: G13-G16 IF 3.616
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